Lake Hylia: The Small island where you get the Fire Arrows 
  Lake Hylia: Behind the Lake Hylia Lab 
  Lake Hylia: Use bugs in the Soft Soil near the Lab 
  Lake Hylia: In the Lab, put the Iron Boots and go to the Poll. Roll-Atack the crate down there. 
  Lake Hylia: Above the Water Temple is a dead tree. Use your Longshot on a spot on the trunk just above the branch to get up and land on the branch. It's on the top of the trunk. 
  Gerudo Valley: When you first enter the valley and are walking across the plank look right 
  Gerudo Valley: The soft soil spot on the ledge that you float to from the right side of the bridge using a chicken. Drop a bottle of bugs on it. 
  Gerudo Valley: Behind the Tent on the back stone (at night) 
  Gerudo Valley: Behind the Tent on the back stone (at night) 
  Gerudo Valley: On the left leg of the stone arch near the tent. 
  Gerudo Fortress: There is one high above the eastern wall of the fortress 
  Gerudo Fortress: In the horseback archery range on the Northern target 
  Haunted Wasteland: Inside the Stone Structure, in the middle of the desert, when you find the Spirit 
  Desert Colossus: When you first get there, head left and it's on a palm tree near a sand pit. 
  Desert Colossus: A soft soil spot has one if you use a bottle of bugs on it 
  Desert Colossus: The magic leaf platform from the previous one will take you to one. 
INSIDE THE DUNGEONS
  Deku Tree: In an alcove on the left side of a room on the third floor. 
  Deku Tree: In the room after you fall through web. On the vines 
  Deku Tree: In the room after you fall through web. On the grate
Deku Tree: Behind the only bombable wall in the Deku tree. You'll have to come back for it later. From start, it's down the big hole, crawl through the small hole, then to your right behind a web. 
  Dodonogo's Cavern: In the passageway to the right of the entrance into the big room, in a secret room on the right wall of the passage. Blow up the doorway by killing an exploding lizard next to it. 
  Dodonogo's Cavern: In the big stairway room, on the vines by the second floor doorway. 
  Dodonogo's Cavern: In the big stairway room, right above the big stairs in a small alcove. In order to get this one you have to return to the cavern after getting the boomerang and use the moving pillar in the big room to get to the second floor, then make your way back to this room and the stairs will be raised so you can get to it. 
  Dodonogo's Cavern: In the room before the boss's room where you have to push some blocks around, there's a bombable door on the north end of the room. Bomb it open and kill the statue inside to reveal this one. 
  Dodonogo's Cavern: Go right from the main room into the hallway with the exploding lizards. To your left is an alcove. Use the scarecrow's song and hookshot to it. 
  Jabu-Jabu's belly: In the room you fall to after falling through a pit (near the Green-electrifiying thing) 
  Jabu-Jabu's belly: Right next to the previous gold skulltula in the same room. 
  Jabu-Jabu's belly: On the vines in the room right before the boss. 
  Forest Temple: Entrance on vines on right wall.
  Forest Temple: On the right wall of the big room, near the stairway opposite the entryway. 
  Forest Temple: In the East Plant Room on the wall on the Island. (use the hookshot on the chest to get on to the island.) 
  Forest Temple: In the West Plant Room on the wall , only reachable from the balcony. 
  Forest Temple: In the rotating room just before the boss, in one of the little alcoves. 
  Bottom of the Well: In the pit room 
  Bottom of the Well: In the room next to the pit room 
  Bottom of the Well: In the Shield-eater room 
  Fire Temple: In the big lava room with the bridge (first room you go through) on the far North side there's a blue block above the doorway. Play the song of time to move it and go through the new door that's revealed. The gold skulltula is in that room. 
  Fire Temple: In the maze like room with the large boulders everywhere, one of the walls can be blown open to reveal a gold skulltula in a small alcove. Walk along the outside walls and listen for it. It's in the northeastern part of the room. 
  Fire Temple: In the room with the Shield-eater just before the boss key room. 
  Fire Temple: On the second floor of the boulder maze above the doorway there is a high platform. Use the Scarecrows song and hookshot to it. Then hookshot over to a platform across from it and it will lift you to a secret area that has a gold skulltula. 
  Fire Temple: Continue past the last gold skulltula and you'll end up in the donut room where the megaton hammer is. To your left on the wall is a skulltula you can get with the hookshot.
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